Evo-Omics Research
We specialize in -omics analyses across both model and non-model organisms, focusing on genomics and transcriptomics of both animals and microorganisms. With over 15 years of research experience, we help you bridge the gap between raw data and biological discovery.
“We are drowning in a sea of data and starving for knowledge.”
— Sydney Brenner
Academic Focus
Support in writing and developing your research, whether it might be grants or papers
Data to Publication
We will journey with you from the first analyses to publication
Research Experience
With over 15 years of international experience across diverse academic systems—from Japan to Germany—we bring a global perspective of what it takes to bring data to life. Our expertise isn’t just in the code; it’s rooted in a decade and a half of navigating the complexities of model and non-model organisms to ensure your research stands on solid ground.
Not just analyses
We provide more than just data processing; we offer a full partnership from the initial free consultation to the final publication. By designing custom, adaptable workflows and providing dedicated support during manuscript revisions, we ensure that your project is not only technically sound but also strategically prepared for the rigors of peer review.
Training Support
We prioritize your lab’s long-term autonomy by offering specialized training sessions for your students and staff, covering everything from custom pipeline operation to modern RNA-seq techniques in the era of AI. Whether you need a short 2-hour consultation or a comprehensive 10-hour training module, we equip your team with the skills necessary to maintain and build upon the tools we develop together.
Featured Pipelines
Pedigree Aligner
A tool for the identification and painting of recombinant regions in chromosomes of haploid genomes
RNA Sign
A scalable Nexflow pipeline using CNN and Ensemble ML methods to identify non-coding RNAs across genomes using only RNA-seq data
Latest Research
Transposon evolution in fungi
We designed a custom pipeline to identify expressed transposons from long reads.
Also, we identified their insertions and tracked their evolution through phylogenetic analyses.
Cancer biomarker discovery
We analyzed data from a 10-year-long longitudinal study on cancer progression to identify new RNA markers.
This used a mix of standard pipelines for differential expression and custom comparison between multiple types of tissues
Automatic miRNA classification
Adding services to your website helps provide value by addressing specific needs or challenges that your clients face. Offer expertise, streamline processes, and create tailored solutions that enhance customer satisfaction.
FAQ
What happens if my research focuses on a very specific or non-model organism?
This is where we specialize. Unlike many standard services that rely on rigid, “off-the-shelf” tools, we focus on building custom pipelines tailored to the unique biological questions of your organism. With 15+ years of experience in genome annotation and non-coding RNAs, we are equipped to handle the computational complexities that come with non-model systems.
What if I only need a standard analysis rather than a custom pipeline?
We handle projects of all scales. While we specialize in complex workflows, we also provide efficient, standard -omics analyses for more straightforward datasets. During our initial free consultation, we will determine the most cost-effective approach for your data, ensuring you don’t pay for unnecessary complexity.
Do we get to keep the tools you develop, or do we have to come back to you for every run?
We prioritize your lab’s independence. Unlike many consultancies that keep their workflows private, we can deliver the full, documented pipeline to your laboratory. We also offer dedicated training sessions for your students or staff to ensure they are fully comfortable running, maintaining, and understanding the tools we’ve built for your project.
Send us a message
P.IVA 18361021001